rs49245758 SNP Detail

Summary

• ID
  rs49245758
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:16422468 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACTCCAAAT CAGACCCAGA AGGTAGAGTT GCCCCACCAG
  GGAGGGAACA GTGTGGGTTC TGAAGTCGAT GAGAAAGGTT TGCTATGAGA TGAGAGTTAA
  G
  GCAGAGGGCA AATCCTACTG AGACTTCTGA GTCCACAGTA GCAGCTCATG TTCCCAGAAG
  CTCAAGAGTT GACATGTTGA CCATGGAGAA CACATCACA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss137182870	ENSMUSSNP3968967	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49245758					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:16422468 () rs orientation: forward

Symbol	Name	Function Class
Gm36372	predicted gene, 36372	within coordinates
Rr262937	regulatory region 262937	1131 bp distal
Rr269311	regulatory region 269311	1919 bp proximal
Rr386910	regulatory region 386910	1959 bp upstream