rs49249772 SNP Detail

Summary

• ID
  rs49249772
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:89623434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTGAGTAC ACTGTAGCTG TCTTCAGAAC ACTAGAAGAG
  GGCAGCAGAT CTCATTACAG ATGGCTGTGA GCCACCATGT GGTTGCTGGG AGTTGAACTC
  R
  GGACTTTTTG AAGAGCAGTC AGTGCTCTTA ACTGCTGAGA CATCTCCCAG CCCTAATACT
  TAATGTTAAC TTAATGATAA CTGTTGGCTA TCAATGCTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss147262062	ENSMUSSNP3459171	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs49249772					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:89623434 () rs orientation: forward

Symbol	Name	Function Class
Bltp3b	bridge-like lipid transfer protein family member 3B	within coordinates
Tssr95182	transcription start site region 95182	1731 bp downstream