rs49260657 SNP Detail

Summary

• ID
  rs49260657
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61333868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAATGTGA TTTCTACTGT
  CAGGAATATA TTATTCAAAA TAATACTGGT TCATGAATAT CCAGAATATA TAACAGAGGC
  CTGCTCTCTA AAATCAGAAT GAAAATAATT AGAAATCTTA GGACTCAAGA TATCTACGAG
  TACAAGATCA CAATGAAAAT TACTGTATCC ATTTCTTCCT TTATATTGCG TTTTAACCAG
  Y
  TGGAGATGAT CTGGACATGA TCTATTGATT TCTGTAAAGG GTTCCGGATT CTAAAGAGCT
  GTTATATAGC AAAGAACTGA TGTGGAAGAA TATCAGCCAA GAAAATCTAG TAAAGGACAA
  GAGCAATAAC AAAATAACAA AATAAACAAC TGTCTCTTTT TTCCCCCACC CGGCAACTGT
  CTCTTATATA TATATAGAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144742883	ENSMUSSNP1837760	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49260657					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61333868 () rs orientation: forward

Symbol	Name	Function Class
Gm72252	predicted gene, 72252	299 bp downstream
Mir344d-1	microRNA 344d-1	928 bp upstream
Mir344d-2	microRNA 344d-2	1152 bp downstream