rs49270037 SNP Detail

Summary

• ID
  rs49270037
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:13438755 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             TAAAAATGGT GTCGCTCGTC ATTTGCTCTG TTAAAGGAAC AAATTAGCCC
  Y
  TTTAAAAATG TCTGGCAATG TAAACAACCG TGAGCTCTTC CACCAAGCTG           
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146822961	ENSMUSSNP2115953	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49270037					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:13438755 () rs orientation: forward

Symbol	Name	Function Class
Adat2	adenosine deaminase, tRNA-specific 2	mRNA-UTR
Gm66583	predicted gene, 66583	877 bp upstream
Rr427807	regulatory region 427807	1224 bp proximal
Rr427808	regulatory region 427808	1717 bp proximal