rs49272741 SNP Detail

Summary

• ID
  rs49272741
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101127945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCCAAGAC ATGGCTCAGT
  CAGTGGAGAT AATAGCCACG GGAATGCATT GCACTTCCCA AGTCTGGACC CTGCAGCAGA
  TATGCAGGAA GGCAGGGATG AATGTCTGCA GCCAATACTT GATTGCCAGG CGTGGTCCTA
  AGGGAGGCAT AGCTGCAGTC AGTCCCTCAC CCCAGTCCCT CTCCTCCCCA CTATTTTGAA
  R
  TAGCAATCTT TTAATGAATG ACAGAACAGT AATTTTAAAA AAGGGAAATA CAAAGCCTGG
  GATATTAGTG ACACTATCTC CCAAGCAGAC TGACTTAGCA TGGACCATAC TATACACCAT
  CAGGAGGACG ATTCAAGGTC AATGGCCTTT AGTACACCCA TGGGCACTGA TGTCTCTGCT
  ATGTCCACCT TTACATCTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851487	CHEV_3_101024552	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs49272741					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101127945 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	531 bp distal