ACTGCTGCAC AGGGAAGCCA AGACTTCACA CTGGTAACTG GGCCAGGGTT GCCAGGGAGA CCAGTGGGGC AGGGAACGTG CAAGACGCTT CACAGAGAGG R AGGACGTTGG GCTTGGATGA CCTAAGTGGA AAGAGATACA AGAGGAGAGT GTGGGATTTA ATTTCCCTTG ATTGGATTAT GGGTGCCTCG ATTCCAAGG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|
ss132366919 | ENSMUSSNP6654608 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | ||
ss323733885 | CHEV_11_69980386 | CHEVERUD | SCREENING_POP | f | SNP | G | A | |
SNP Consensus Information | ||||||||
SNP | Consensus Type | DBA/2J |
LG/J |
SM/J |
||||
rs49274626 | SNP | A | G | A |
Location: Chr11:70057710 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Clec10a | C-type lectin domain family 10, member A | within coordinates | ||||||
Rr251315 | regulatory region 251315 | within coordinates | ||||||
Tssr102659 | transcription start site region 102659 | 221 bp downstream | ||||||
Tssr102660 | transcription start site region 102660 | 177 bp downstream | ||||||
Tssr102661 | transcription start site region 102661 | 100 bp downstream | ||||||
Tssr102662 | transcription start site region 102662 | 300 bp upstream | ||||||
Tssr102663 | transcription start site region 102663 | 318 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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