rs49281103 SNP Detail

Summary

• ID
  rs49281103
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:118786412 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTGG GCAAAGGGAC TGCATGAGGG
  Y
  TATTGAAGGA CCTACTCGTA CCCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss145804503	ENSMUSSNP4124536	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49281103					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:118786412 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19632	CpG island 19632	1630 bp distal
Gm73654	predicted gene, 73654	981 bp downstream
Rr381384	regulatory region 381384	62 bp downstream
Rr654601	regulatory region 654601	1126 bp distal
Rr654602	regulatory region 654602	498 bp distal
Rr654603	regulatory region 654603	601 bp distal