rs49286097 SNP Detail

Summary

• ID
  rs49286097
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:83813875 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAACCCAAAA CTAAGACCAA ACAAAGAAGG TTCTGAAGTA
  AGGTTGCTGT GGTTTGGGAA CGGCCTGTCT AAGGCGATCC ACTCACTCGA TCGGCAGGTA
  Y
  AACCATCACC TACTCTACAC TAGACATGCA CAAGAACGTC GGCTAGCTTT TTCCCTTTCT
  CTCTCTCTCT CTTTTTTTTT TTTCGTTTGG TTTTTCGAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146112526	ENSMUSSNP5943073	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49286097					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:83813875 () rs orientation: forward

Symbol	Name	Function Class
Cox7a2l	cytochrome c oxidase subunit 7A2 like	within coordinates
Rr333502	regulatory region 333502	675 bp distal
Rr333503	regulatory region 333503	326 bp proximal
Rr336331	regulatory region 336331	within coordinates