rs49303142 SNP Detail

Summary

• ID
  rs49303142
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:79150522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTAATAA ATACTACAAG
  TTAAGACATA AACTATTCAA CTCTACAGAT TCACTGGTCT CCATAGTTAG TGAAGGAGGA
  GAACCAGTAA AGAGCTGATG CTGATGCAGG TCTAGATAAT TAGCACTGTC TCTCACAGAC
  AATAACAACA GACAAAACAG TGGGCAGATA TTTGCATTCA GCGGTTACCT TTCCAGCATC
  M
  TTTTCTTCCA AATGTGTGAG GGGTCTCTGC AGCCTTCAGG GGAAGCAGAG AGACAAGCTG
  GGGGCGGGGC AGTAGCCAGC GTTCATTCAA ACTTGGGAAG TCTGGCTGTG AGTGTTTCTT
  ATGCTGTATT TAAACACAGC ACAATATGGT GAAAACTATT CCTGTATTAA CTAACTCAAT
  CCTGCATGCA CAACAAAGTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52508687	NES15574189	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs49303142					SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52508687	NES15574189	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:79150522 () rs orientation: forward

Symbol	Name	Function Class
Rr293691	regulatory region 293691	1078 bp proximal
Rr293692	regulatory region 293692	1478 bp proximal
Rr369884	regulatory region 369884	1211 bp upstream
Vwa8	von Willebrand factor A domain containing 8	within coordinates