rs49316005 SNP Detail

Summary

• ID
  rs49316005
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16456039 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGGGCTCCTG CTCACAGGTG AGGCCAGCCC TGGAGTGGTG
  TGGGGAGGAT GCTCTGACAG GAAGGGACTC TGGGAGGACC CTCTGCTTCA GGTTGAGAGG
  R
  GAGGACACGG AGGGACCCAG GCTGCTCAGG TGGATGCTCT CAGGGAGCAA GGAGTGCTCA
  GAGGGGAGGA AAAGCCAGAT CCCTCTTTAT TTAAAGTTAC C                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148394934	ENSMUSSNP2375472	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49316005					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16456039 () rs orientation: forward

Symbol	Name	Function Class
Ceacam9	CEA cell adhesion molecule 9	within coordinates
Cpgi18385	CpG island 18385	1575 bp proximal
Tssr64618	transcription start site region 64618	155 bp downstream