rs49317373 SNP Detail

Summary

• ID
  rs49317373
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:71045525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTAATACT GAGATATTCT
  TTTCACTAGT ACTCTTTTCC TGCAAATATG CCATTATCTG ACTGAAGTAC CGGTCATGAC
  CACTGTCCAT GCTGCTTGTC CTCTGGAGGA GCCAAGTTGA GAACCTCAGT TATGGAGGCT
  GCTTCTGTGC ATTTTTGCTG TTGGCCACAG AAAGTATGTT CTGTCAGGGC TTGTGTCTCA
  K
  CCCATCCTAA CCAAATCTGA ATGGAGGCAT GGGTCAGACA GAGCACTCGG TGACTTTGTA
  TTGCAGTAAG AAGACAGAGA AAGTAATGGA AACACACTTT AATACATCAA TAATTCATGA
  AATCTAAGGT ATTTCCTTTT TATAAGATTT AAGATGCTCA CTGTATAAAA TGTGTGTTAT
  ATTAATGTAT AATGTAATAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132382748	ENSMUSSNP3423199	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49317373					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:71045525 () rs orientation: forward

Symbol	Name	Function Class
Nlrp1b	NLR family, pyrin domain containing 1B	within coordinates