rs49317697 SNP Detail

Summary

• ID
  rs49317697
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:25847960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGCGGGGGC GGGGGCGGGG GCGGGGGCGG GGGCGGGGGC
  GGGGGCGGGA AAGTTGTTTT CCTAAGTAGT GCAGAGAAGT AGGTAGTTAC AGTGCCACAC
  R
  TGGGAAGCTC TGTAGGACTG CAGGGGGTAA GGACAGCATT CCACGAAGGA AAATCCTCCT
  ATCTCCTAAT CATGACTTTA GGAGTGATTG CAGCAATGTG                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss62156908	NES17192312	PERLEGEN	MM_PANEL2	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs49317697					SNP	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62156908	NES17192312	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:25847960 () rs orientation: forward

Symbol	Name	Function Class
Anxa11	annexin A11	within coordinates
Rr489273	regulatory region 489273	1926 bp distal
Rr489274	regulatory region 489274	1039 bp distal
Rr489275	regulatory region 489275	748 bp proximal
Tssr127771	transcription start site region 127771	801 bp downstream