rs49320566 SNP Detail

Summary

• ID
  rs49320566
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116205749 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAAGTACG CACATAAAAC
  ACTCATATGC ACACATAAGT CTTAGAAAGA AATAACTTAT GCTAAGATCC CAACTCAGAA
  ACTCACCAAT CTGCCACCCA AGTGAGCCCG ATTCGTAAGG AAGCCAAAAA AAACAAAGTT
  GGATTGTTTC TTTTTAAAGC TTTCTATGAG CCCATGCATG CCTTTTAGCC GTGTTCATAC
  G
  TCTCACACAG AGTCTAGCCT TGTTTCAGAC TCAACGTGCA GAAAACAAGT TTTCTGGGGC
  CCCCTCCCAC TGCACGTTTG GGCTCATAGC AGATCAGGAT GCAAATGGTA GTCAGAGGGA
  AATGCACTGA CCCCACCATG CGCAGGACCA AGAACGTACT CAGTCAAGGC CGGATCTCAC
  CTGACCGGGC CCTTTAATCT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135669680	ENSMUSSNP6082973	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49320566					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116205749 () rs orientation: forward

Symbol	Name	Function Class
Cdc14a	CDC14 cell division cycle 14A	within coordinates
Rr70202	regulatory region 70202	within coordinates
Rr78756	regulatory region 78756	550 bp distal
Rr78757	regulatory region 78757	1903 bp proximal