TCTTGTGTGT CTAGTGATAG GGGTCCTTTC CAGACACCTA TGTGTGGATA ATTTGTGGGA CCCAGGCTTC CTTTTAACCT GGTGCCTTGC CTCTGAGAAG AATTCCAAAG AGAACGGGCT AGGTGGATGA CCTGCAGTGG CAGACCATTG GCAGAGGAAG TGGATCTCTG CCCTTGTCTC AAAAGGCACT GATGAGAAGC R GTGACAGGAC TGGAAACAGA GCTCACCCTT TCCCTCAATG ACCCACATCT TCCAGCTGGG TCCCACAGCC CACAGGCTCC ACACCCCCAG CAAGGCCACT ACTACCTCTG CCCTGCTCCA TTGTCTTTAC AAACTCCCAC TCAGACTCAT GGGAAGGTAC AAAGTGAGAA GAGTGGCTTT CATGGTCTAA GAAGCCTGTG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
MSM/Ms |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss148811267 | ENSMUSSNP7059298 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | G | A | ||
ss324295894 | CHEV_13_24466329 | CHEVERUD | SCREENING_POP | f | SNP | G | A | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
MSM/Ms |
SM/J |
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rs49320630 | SNP | G | G | G | G | A | A |
Location: Chr13:24558443 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cmah | cytidine monophospho-N-acetylneuraminic acid hydroxylase | within coordinates | ||||||
Gm11342 | predicted gene 11342 | within coordinates | ||||||
Rr476038 | regulatory region 476038 | 139 bp proximal | ||||||
Rr476039 | regulatory region 476039 | 881 bp proximal | ||||||
Rr476040 | regulatory region 476040 | 1480 bp proximal | ||||||
Tssr4016 | transcription start site region 4016 | 1590 bp upstream | ||||||
Tssr118891 | transcription start site region 118891 | 943 bp downstream | ||||||
Tssr118892 | transcription start site region 118892 | 1574 bp upstream | ||||||
Tssr118893 | transcription start site region 118893 | 1610 bp upstream | ||||||
Tssr118894 | transcription start site region 118894 | 1674 bp upstream | ||||||
Tssr118895 | transcription start site region 118895 | 1708 bp upstream | ||||||
Tssr121784 | transcription start site region 121784 | 1482 bp downstream | ||||||
Tssr121785 | transcription start site region 121785 | 1502 bp downstream | ||||||
Tssr121786 | transcription start site region 121786 | 1562 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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