rs49336451 SNP Detail

Summary

• ID
  rs49336451
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:12218081 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGAGGGA CATTAAAATA
  CAGTCAAATG AGAAACTCCA AAGGGAAGAG AAAAGAGGTG AGGTGCAGTT TGTAAGGCTC
  CAGGAGTCTT CTGGCCTCCT CCCCTGTGGT GCGGGCTGCA GCAGCTCCGT CCTTGCTTGT
  GTCTTTGTAC AATGTCTATG TGTCTGTTCT CCAGCAGAGA AAGGCTGAAG CCCCCCCCCC
  Y
  TCCCCAGCGT CAGGCTCTTG CGCCACCCAC TCACTGGTCT TGTTGAGTGC TGCTGGCTTC
  AGACAGAGAA GGATGTGTGA GGCCCATTTC AGGATAGGAT CTCTTCTCAG AAGGCAGCTG
  CAGGGAGGCA TCCCCTGAGG GGCTTTTGGA TGCCTCTTGG GAAGGGGGAT GGAGGAGTCA
  AGATTAGGCC CGCATTGATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147080822	ENSMUSSNP819945	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49336451					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:12218081 () rs orientation: forward

Symbol	Name	Function Class
D15Mit1005	DNA segment, Chr 15, Massachusetts Institute of Technology 1005	323 bp proximal
D15Mit1006	DNA segment, Chr 15, Massachusetts Institute of Technology 1006	187 bp proximal
Mtmr12	myotubularin related protein 12	within coordinates