rs49337879 SNP Detail

Summary

• ID
  rs49337879
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106017630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTTGAACAA TCTTCTTCTA CTTCCCTCAT TTCAGGATAC
  AAAGCTTTGC TCATGACTTC TTTGAGAAAC TCAGTGTCCA TTACCTCCTG GTGCTCTATG
  C
  TTATGAGGTC TCTTCTTGGG AAGATCAGTT TGCACTATAG GTGGTAACAG AACAAATCCA
  GCCAGCCAGA TGCAGTGCTG CCTTTAGCTT TAGCTACCT                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145611752	ENSMUSSNP3663873	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss322371150	CHEV_7_113561937	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49337879					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106017630 () rs orientation: forward

Symbol	Name	Function Class
Gvin-ps6	GTPase, very large interferon inducible, pseudogene 6	within coordinates