rs49340019 SNP Detail

Summary

• ID
  rs49340019
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141431060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATTTGGCA GGCTGAGGCA
  GAAGAACTGT CGAGTTGTAG GGTAGTTTGG GCTACAGAAG GCATTCAGAG ACAGGTTGGA
  CATGTTCATG AGACCCTTTC TCAAACTATA AAGAAATTTA AAAGGGTTAG AGATGGTCAT
  ATTGATAGAC TATTGCTAAC TTATATGTAT GAAGTTCTAG GCTCAGTACT AGAAAAATAT
  R
  GGTATCTAAC ATGTTGGTGA TGTTGTATCT CTTTGTAAAA TGGAATGACT GGTATGCTTC
  TCCCTCCGCT CATGTCAGGA AGCTTTAAGC TGTGAACTGC AGGGTGGAGA CAGAAGCATC
  ACCTTCTGAC TAAAATCTAC TGCTTAGGTT TGGCCTGTGG GCACACTAGG TTGAAAAGGC
  TACTGAGCAC ACATTCAGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61091299	NES16613385	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs49340019					SNP	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61091299	NES16613385	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141431060 () rs orientation: forward

Symbol	Name	Function Class
Unc5c	unc-5 netrin receptor C	within coordinates