rs49342204 SNP Detail

Summary

• ID
  rs49342204
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143972060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TTGGGTCACT TGTTGACTAC AGGGCCTCGT TATTTGATTG
  ACAGCCCTAC TAGAGTCTCA AGGAATGTGA GAAGGGCAGA TCACAAAGGA AAAGACCTTT
  W
  ACCAGAATTT TTAAAAAAAG AAAGAAAAAC AGAGGCACCC TATCTTTGAA CCTAAATCAG
  TAGCAGAAAC TGTTGGAACT CATTAGCATC CCTTATCTCA A                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136029577	ENSMUSSNP3566226	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49342204					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143972060 () rs orientation: forward

Symbol	Name	Function Class
Rr74711	regulatory region 74711	1301 bp distal
Rr74712	regulatory region 74712	415 bp proximal