rs49346672 SNP Detail

Summary

• ID
  rs49346672
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:160827783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGCA GGGTCCCTCT AAATCATGTA
  Y
  ATATGGAGAA GCTTGTAGCC TCCGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145903609	ENSMUSSNP5994033	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49346672					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:160827783 () rs orientation: forward

Symbol	Name	Function Class
Gm37072	predicted gene, 37072	796 bp downstream
Serpinc1	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1	within coordinates
Tssr9670	transcription start site region 9670	1613 bp upstream