rs49349219 SNP Detail

Summary

• ID
  rs49349219
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:169118290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACCCAAGCT CTCTCGGCCA TGGCCTGGGA CTGTGGACTC
  AGATCTAACA TGCTTTTCTT TTCTATGTTT AAAAAAAAGA TTTATTTATT TTATGTATAT
  A
  AGTACACTGT GGCTGTTTTC AGACACACCA GAAGAGGGCA TCGGATCTCA TTACTGATGG
  TTGTAAGCCA CCATGTGGTT GCCGGGAATT GAACTCAGG                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148281494	ENSMUSSNP372316	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49349219					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169118290 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr117	DNA Segment, Chr 2, Derry C. Roopenian 117	330 bp distal
D2Mit343	DNA segment, Chr 2, Massachusetts Institute of Technology 343	366 bp distal