rs49350193 SNP Detail

Summary

• ID
  rs49350193
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114159762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTC AAATTCTTTT CAAAAGGAAC
  R
  GTTCTTGGTC AGAGTGGGCC GGAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	MSM/Ms	SM/J
ss138771882	ENSMUSSNP3048275	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss324181036	CHEV_12_115434353	CHEVERUD	SCREENING_POP	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	MSM/Ms	SM/J
rs49350193					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114159762 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv3-3	immunoglobulin heavy variable V3-3	297 bp downstream
Tssr118065	transcription start site region 118065	782 bp downstream