rs49353576 SNP Detail

Summary

• ID
  rs49353576
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:54689644 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCCCTCAG CCTGTGTTTC
  CTGAGTACTG ACACATCCAT CACCTTTAGT AGCAAAGACA TAACAAAAGA CAAATGACCT
  CTGCTCTCCT GGGACATCTA TTCTTGTGAA TGGAGTGAAC AGCAAGTGTG ATAAATTTGG
  GGAATATATA ATATGTTGCA TAGCAACAAG TATTGAGGGC AAAATTTAGA TGAGGACGGG
  G
  GATGCTGCTT CCATGGGGTT GTGCATGATA TGGCTAGAGA AGGCCCCACT GGGATCTTGG
  GCTATCAGTA AACAAGCCAT GTAGCTCTTC GAGAAGAATC TTCCAAGCAA ATGCCAAAAG
  CCTGAGGTGA TAGATTGACT CACTAAATCC ATAGGGAACA AGGCAGTGTG GCTAGACAGA
  AGGAGCAAGG AAGAGAACAT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss139563052	ENSMUSSNP2530544	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss324637287	CHEV_14_55071024	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs49353576					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:54689644 () rs orientation: forward

Symbol	Name	Function Class
Rr389675	regulatory region 389675	within coordinates