rs49355338 SNP Detail

Summary

• ID
  rs49355338
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:82926053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAACTTGAA AATATGCCCA TTGTGTGAAT CTAAGGGAAA
  TGCTTACCCA GACCACAATG GGGTGTCTCA CCTCCTCTCA GAAGGACTAT TAAAAAAAAA
  C
  AAACCCCTAA GGAAAATGAG TACTTGCAAG GATATGGAGA AAGGAAATAC ACACTGGTGT
  TGGTAATGTG ACACAGATAT TATAAAGAAG GTACAGAGG                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136700271	ENSMUSSNP4139604	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49355338					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:82926053 () rs orientation: forward

Symbol	Name	Function Class
Gm39383	predicted gene, 39383	1339 bp downstream
Rr401563	regulatory region 401563	within coordinates