rs49357708 SNP Detail

Summary

• ID
  rs49357708
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:47509379 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGAGAGCTTC ATCAGGCTTC AGAATAGTTA ATAAAAGGGC
  CAACCCCAGG GGAGATGGGC TATGGTACAG CTAGGCAGAT ATCAGAGCTC CTCCCACCGA
  M
  CCCCCTCCCC AAACTGGTTT CCATTGTGGG CGCTACCCGG TCTGAGGAGT TTATGGATGG
  GCTAAGATGA TTCCTTCCTC TTTTGTGGGA AGCATTGGTT G                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss134165352	ENSMUSSNP1634062	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs49357708					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:47509379 () rs orientation: forward

Symbol	Name	Function Class
Elf4	E74 like ETS transcription factor 4	within coordinates
Rr9784	regulatory region 9784	580 bp distal
Tssr163285	transcription start site region 163285	1340 bp upstream