rs49359065 SNP Detail

Summary

• ID
  rs49359065
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:84565592 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATATTTA TTTATGTGTA
  TGTGTGTATC TTTATGAGAC TCTATCACAT ATGCATGCAG GTACGTGTGA AGGCCAGAAG
  AGGGCGTTGG ATCCCTTGGA TCTGGAGTTC CAGGCAGATG TAAGGCATCT AGCATAGGTG
  CTGGAAAACA AACTTGGGTT TTTCAGAAGA AGAGCTGGTG TTCTTCACGG CTGAGCTGTC
  K
  CTCTAGCCCC GGCCCTGCTG TTTCACAGAA AATCTAGTTA GAGGAAGGAA GAATGAGACC
  ATGGGTGTGT GACTCCCAAT TCTGTGGACC AACCGTGGGC AACTGTATTC CTCCCTTCCC
  CTGCAGGAGT TCCCCGAGTT GCTGCAGCTT GACTACTCTG GCAGGGTGGG GCAAGAGTAC
  ATAAACATGA CACATGTGTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135427439	ENSMUSSNP4007764	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49359065					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:84565592 () rs orientation: forward

Symbol	Name	Function Class
Gm37240	predicted gene, 37240	within coordinates
Rr68542	regulatory region 68542	within coordinates
Rr68543	regulatory region 68543	609 bp proximal
Rr76452	regulatory region 76452	700 bp proximal
Rr83250	regulatory region 83250	1679 bp proximal