rs49362344 SNP Detail

Summary

• ID
  rs49362344
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:100005297 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGCACCTG GGTTCCAAAG
  GATCTGCTCT GCCCTCTGCT GCCCTCTGCT GCCCTCTGCC AGCGCTGCAC CCGTGTGCAC
  AAACCCTCAC ACAGATGCAC ATATAAACAC ATACATTAAA TTTGTTTTAA ATTAACTCAT
  AATTTAACTT CCTTTTAATG GTGAGTTAGA ACGAGCAGGT TCTCTTGCAG CCCTGACAGG
  R
  CTTACTGTTT CCTCCAAACC CTCGAGGGAC TAGCAACCTC ACATGCTAAA CAAAGACATG
  TGGCTGCCCA GAGTGCAACC ATACAGTTCC TTAGACTTGA CATGGAAGAG TAACCTGCTA
  TTTTAAGCAG TCCTTCAGAA ACAAACAAAC AAACAAACAA GAGGTATGGT AGAGCTGACT
  GAAGATGGCA CGTTGCCCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52683314	NES15524622	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs49362344					SNP	G	G	G	A	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52683314	NES15524622	PERLEGEN	MM_PANEL	f	SNP	A/G