rs49365668 SNP Detail

Summary

• ID
  rs49365668
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:139534623 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTACTGTT TAGATAGCTT TGAGACAGAT AACTATGAAT
  TTTCTGAGTT TCAGGTACTG TCTGGAACTT GTGAGTTGTT TATTTCCTGA GTCTTCATAA
  R
  CCTTTCTACA CGGTGGAGTG TTTTGGTTAA GAGGTAATTG TTACACAACA AACAAACATG
  TAATAACAAT GAGCCCTGGG AGTTCAGTGA CAGTTCACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss133918678	ENSMUSSNP4598332	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss322020311	CHEV_6_139506146	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs49365668					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:139534623 () rs orientation: forward

Symbol	Name	Function Class
4930404I20Rik	RIKEN cDNA 4930404I20 gene	within coordinates
Gm67453	predicted gene, 67453	91 bp upstream