rs49367119 SNP Detail

Summary

• ID
  rs49367119
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:144554721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGCCTTAGC AACTGCTGCA TTCTAAGATT TGTCGGTAGC
  CCGGGTGCTA CAAGAAGAGC ACATCATTGT TCTATCTCTC ATATTTAATC CTTCAGCATA
  R
  TTGGATAAAA TTGGCAACTA TTATGGTGTG ACTGTGACAT GATTTCTGTC CCTGGATGGT
  AGTACCACCA AAGCCACGTG AACTCCTGTG TGTTGGCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147805064	ENSMUSSNP2533034	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49367119					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144554721 () rs orientation: forward

Symbol	Name	Function Class
Dtd1	D-tyrosyl-tRNA deacylase 1	within coordinates
Rr374001	regulatory region 374001	1950 bp upstream
Tssr20549	transcription start site region 20549	1982 bp upstream
Tssr26613	transcription start site region 26613	1757 bp downstream