rs49373962 SNP Detail

Summary

• ID
  rs49373962
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106017392 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAGAAACGA TCACTTGCTA CTGAACTAGT ACAACAATCA
  ATGACAAAGT GGTCTGTTTT ATGCCTATGC CAACCATTGA CAGCCTGAGG ACGGTGGAAT
  S
  GCACACTGTG GTCTCCTTCA TGTTGGGGAA TGGTGTTTGT ACAAATTGCC TTACAAAAAA
  GGACACTGTT TCCAGCAGCC ACAGAGATGT TCAGAGAGA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss145611742	ENSMUSSNP5154066	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss322371148	CHEV_7_113561699	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs49373962					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106017392 () rs orientation: forward

Symbol	Name	Function Class
Gvin-ps6	GTPase, very large interferon inducible, pseudogene 6	within coordinates