rs49374320 SNP Detail

Summary

• ID
  rs49374320
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:46031356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGGCCCACTG TGGGTAGTAC AATCCCTGGG CTGGTAATCT
  TGGGTTCTAT AAGAAAGCAA GCTGAGCAAA CCAAGAGAAT CAAGCCAGTA AGTAACATCC
  S
  TCCATGGCCT CTGCATCAGC TCCTGCTTCC TGACCTGCTT GAGTTCCAGT CCTGACTTCC
  TTTGGTGATG AACAATAGTG TAGAAGTGTA AGCTAAATAA A                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147250816	ENSMUSSNP2093836	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49374320					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:46031356 () rs orientation: forward

Symbol	Name	Function Class
Rr662882	regulatory region 662882	1330 bp proximal
Sorbs2	sorbin and SH3 domain containing 2	within coordinates
Tssr77133	transcription start site region 77133	1623 bp upstream