rs49375490 SNP Detail

Summary

• ID
  rs49375490
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:64733823 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CATGTGGTAC ACACACATTC ACATGTATAA AAAAAATTTA
  AATTACAAAC AATAAAAACA GGCCTATGTA TGGACTAAAT TGGGTAGCAA AGCTAAGTGA
  S
  CCCCCCTCAG GTTGTGAATT GGGTTTTATC TGCACATCTT TATGTATTTT AGAAGAGATT
  GTTAGCATTA ATTAGTTTTT CTAGGGCAGT GCATGACACC T                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss136565455	ENSMUSSNP3698983	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs49375490					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:64733823 () rs orientation: forward

Symbol	Name	Function Class
Dennd4a	DENN domain containing 4A	within coordinates
Rr201294	regulatory region 201294	378 bp proximal
Rr210200	regulatory region 210200	1579 bp proximal