rs49382139 SNP Detail

Summary

• ID
  rs49382139
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27721719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTCCACAT GACTGTATCT CAGCCTGTGC TTTTAAGTTT
  TAACATAACT ATATGACCTT AACTTATGAC CCTTCTAGAT GAACACACAA AAGATACCCA
  Y
  TTTTAGTATG AATGGACATA AAACTAGTCA TCTACAAGTG GACACCTGAT TTCCTGTCTT
  TATCCATAGA TGATGTTGCA GTGTATAATT AATACCCTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148886304	ENSMUSSNP1791216	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49382139					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27721719 () rs orientation: forward

Symbol	Name	Function Class
Adrb3	adrenergic receptor, beta 3	886 bp upstream
Gm45470	predicted gene 45470	within coordinates
Gm63998	predicted gene, 63998	1690 bp downstream
Tssr80798	transcription start site region 80798	844 bp upstream