rs49392212 SNP Detail

Summary

• ID
  rs49392212
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:131229222 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTGAAGC ATTTGCAAGG
  GGTAGAGAAC CCCTGTAATT AAAAAGAAGG ATGAAAGCTG CTGGGGGAAT GGAGCTTCTG
  ACATTGGATT CCATCTACTC TGCAGGGAAA CAGCCCCCGG GGAACAGCCC CTTCCTTTGC
  TGCCCCAATG AGGAAACACC CCATCCTTTG ATAGGCAGTC ATTAATCTAT GGATTAAAAA
  M
  CCCATACTTA GCTACCTCCC TTGATCCCTT TTGGCACATG TTGTAAACAG AAGAATATGG
  CTCCACGGGG CCAACCAGGA ACCCAGGGCT GGGGAAATGA TCTCTCTGCT AGACTGGAAA
  AGACAGACAC CCTGACTGTT TGACCAACAA ATGTACAGAA AATAGCGGCT GGTAAGTAGC
  AATTACGTAA TAATCTTGTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss145934711	ENSMUSSNP5673887	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49392212					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:131229222 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19823	CpG island 19823	836 bp proximal
Rr656477	regulatory region 656477	750 bp proximal