rs49394409 SNP Detail

Summary

• ID
  rs49394409
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:94268116 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      T GACTCATTGC TCCAAGGTAT GCTAATCATA AAACAGATAG
  AGACATTCCT CCACCCACCC GCTTCCTGGG TTCAAAGAGT GTTCATTCAA AGAAAGTCAC
  M
  CTGACCATTG AAAGTCACCC TGACCATTGC CGGAACCCGC TATGCAGATG TGCTATTGTT
  AGGGGCTCTT AGAAACTGTC TTGAGAGATA ACCTGCACAA T                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss138783750	ENSMUSSNP4797183	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49394409					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:94268116 () rs orientation: reverse

Symbol	Name	Function Class
Rr382481	regulatory region 382481	within coordinates