rs49427195 SNP Detail

Summary

• ID
  rs49427195
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:54437733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGTGGGTAT GGGGTCTTTT GGTATAGCAT TGGAAATGTA
  AATGAGCTAA ATACCTAATA AAAAATTAAA AAAAAAGAAA GAGTATCAAA ATTTAGAGGC
  R
  TAGACAGTTA TATTGTTTCT CTAAAATCGG TCCTTATTAC AAGAGGGCCA AGATGCTCAG
  ATTAAAAAGT ATTTTACGTT TGAGTCAATG CAGGGCTCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss145029462	ENSMUSSNP2829535	ENSEMBL	ENSEMBL_Sanger	r	SNP	C
ss325420994	CHEV_17_54270031	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs49427195					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:54437733 () rs orientation: forward

Symbol	Name	Function Class
Rr392758	regulatory region 392758	1454 bp upstream