rs49435544 SNP Detail

Summary

• ID
  rs49435544
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:71962787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCACAAAT TACAGCTAGA TGTGCAACAG
  TAAAATCTTT TGCCATAATG GATTTTATTA TGTTTATGCA AAATTTTGCT AGCTATATTA
  AGTCTGTCTT AGTCTATTAT CCATGCTATG TCTTTGATGG AAACGAAATG CCTTATTATC
  R
  TATAGTTCTA CATTAGTTCT CCTTAGTTCT CAGTTGTAGC ATTACTTTTT TGTCTGATAA
  TAACATAACT ATGACAGCTA CATTCTATAG TATTTTTATT ATTAATACCT TACATCCTAA
  AAAGCAGTGG TTTAAAGAAC CCCTTCCATA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss144648000	ENSMUSSNP1681672	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
ss319787562	CHEV_1_71970202	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49435544					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:71962787 () rs orientation: forward

Symbol	Name	Function Class
Gm70455	predicted gene, 70455	946 bp downstream