rs49442918 SNP Detail

Summary

• ID
  rs49442918
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:79704148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCAG CCATCCTGTT ATCGGTGGCT
  T
  TTGGGTAGTG GGCATCTCTA GAGCG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss145137833	ENSMUSSNP3061713	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss322280080	CHEV_7_87199286	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs49442918					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79704148 () rs orientation: forward

Symbol	Name	Function Class
Rr649767	regulatory region 649767	1657 bp distal
Rr649768	regulatory region 649768	907 bp distal
Rr649769	regulatory region 649769	1025 bp distal
Rr649770	regulatory region 649770	1349 bp proximal
Tssr73200	transcription start site region 73200	1782 bp downstream
Zfp710	zinc finger protein 710	Intron