rs49451667 SNP Detail

Summary

• ID
  rs49451667
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:3557761 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAATCCACA GGTTAAGAAG
  CACTGTATTA GAATATTACT CATGTCATTT CCTTACCATG TAGAGTCCTG ACACGAACCT
  CAAAAGTGCT ACACACTAGT TATCAGACTT ATAATGTGAT TAGCAAATTC ATAACATTAA
  AATTTTGTAC TTGATTTAAA TGTATAGAGG GCTATTTCTC AATTTTTTTT GGAATTTTAT
  W
  AAAAAAAAAC TTAATTGAAT TATCTAGATT ATCTTTAAAA GTTTCCAAGA AATTCAAGAA
  TCTGAATTCT TGTTCTTTTG GATTCAAGTT CTTTTGTCCT TTCTCTCTGT TAGGTCTCCT
  AAGCAATAGC CTCCTTAAAA CTACAAACAT AAGAATGAAC AATTAAGATT CCATGACAAA
  TTTATAAGAT TCAAAGATAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145941564	ENSMUSSNP4714780	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49451667					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:3557761 () rs orientation: forward

Symbol	Name	Function Class
B230117O15Rik	RIKEN cDNA B230117O15 gene	1536 bp upstream
Tmem68	transmembrane protein 68	within coordinates