rs49457470 SNP Detail

Summary

• ID
  rs49457470
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:72289766 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTGA TATTACAAAT AATGTATATG
  M
  AATAAGTCTC CAGTTGTTTT TTTTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss135302070	ENSMUSSNP1023760	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C		C
ss320797521	CHEV_3_72186355	CHEVERUD	SCREENING_POP	f	SNP				C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs49457470					SNP	C	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:72289766 () rs orientation: forward

Symbol	Name	Function Class
Rr578287	regulatory region 578287	1996 bp distal