rs49470696 SNP Detail

Summary

• ID
  rs49470696
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:52403618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCAGGGCAG GTGAAAGCGT GCAGCATCGC CCCTCGTCCC
  GCGACCGGCC CCATCAGGCT CATCATGAGG TGCCCTAAAG TGAGATACCA CACCAAGGTC
  C
  GGGCTGGCAG GGGGCTTCAG CCTGGAGGAG CTCAGGGTGG CTGGCATCCA CAAGAAAATA
  GCTCGCACCA TCGGCATCTC TGTGGACCCG AGGAGGCGA                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss134173807	ENSMUSSNP2909180	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs49470696					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:52403618 () rs orientation: forward

Symbol	Name	Function Class
Gm14585	predicted gene 14585	within coordinates
Pabir3	PABIR family member 3	within coordinates