rs49476129 SNP Detail

Summary

• ID
  rs49476129
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110548373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AAACCTGATT TTAATCGTGG TCTCAGGGAT CCGTGAAAAA
  GTTGTGAAAT CAGACATTGC TCTCTCGCGG CCTTGGAGGC GGGTCCCACG GGGAAGAAGG
  R
  CATGTGCAGG GAGGGAGAGC CAGCACGGCT AGTCAAAAAG GCGGCCCCAG CTGAGGGTGA
  ACAGGTTGGC CACTTGGGTG AGAACACTTC CTGAGAAACT T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss138691849	ENSMUSSNP6071558	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49476129					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110548373 () rs orientation: forward

Symbol	Name	Function Class
Ppp2r5c	protein phosphatase 2, regulatory subunit B', gamma	within coordinates
Rr387783	regulatory region 387783	1127 bp upstream