rs49477868 SNP Detail

Summary

• ID
  rs49477868
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:16424578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACACTTGAG TGTGTGCCTT GTATGCATGT GCTTGCATGT
  TCATACATGC CCCAACATGA GTGAAGATGT TGAAGTGAGA TCAAAGGATG ACTTACAATA
  K
  TTGGCTTCAA CCTGCTACTA TATGGGCCTA AATCTAGTGG CTTCAGGGAA CCCCCTTTGT
  TTGTGTCCTT TGTTATATCC AAGATCTTCC ACTGGGACC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137182921	ENSMUSSNP2875818	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49477868					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:16424578 () rs orientation: forward

Symbol	Name	Function Class
Gm36372	predicted gene, 36372	within coordinates
Rr269311	regulatory region 269311	within coordinates
Rr386910	regulatory region 386910	within coordinates