rs49490423 SNP Detail

Summary

• ID
  rs49490423
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:33875841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACC AAGTTCCTGC TTCCCCGTGT
  Y
  GTCACCAAAA GAAAAATTTC CGCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148780139	ENSMUSSNP706619	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss322148805	CHEV_7_34961435	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49490423					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:33875841 () rs orientation: forward

Symbol	Name	Function Class
Gm12778	predicted gene 12778	372 bp downstream
Gm12783	predicted gene 12783	342 bp upstream
Rr380644	regulatory region 380644	within coordinates