rs49495902 SNP Detail

Summary

• ID
  rs49495902
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:126263037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAAGAACT GCAGGGGTAG
  GCAGAAGAAC GCATAGATAA TTTTGTAAGA TATGAGCAGG GACCTGGTCA TCTTTCTTCT
  CTGTCATCCT GAACAGTCAG GTCCTTCTCC TCCTGTTACA TTTTGTTCTT GTCATATTTT
  AGAAACAAGT AAAAGAAGGG GAAATGAGAA ACACGCCTGC AGCCTCTCAC ACGCGGAAGA
  Y
  CCTCCTACAC TACAAGCTAC ATCTGGTGCA CGTAGTGTTT ATGCTACCTG CTACTGCATG
  GTAAGTCACT CCAGTTCTCC ACAAGGAAAT GACACGTGTC TGCCATCTGG ATACGTATCA
  AGAGGGAAAG GCTAAGCTCT GGTCTGTCCA GGCAATATCA TTTGAAATAG CAATGTGGGC
  ACTGGAAGAT GAAAACAGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135833535	ENSMUSSNP3648761	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49495902					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:126263037 () rs orientation: forward

Symbol	Name	Function Class
Gm17225	predicted gene 17225	within coordinates
Gm46823	predicted gene, 46823	within coordinates