rs49505587 SNP Detail

Summary

• ID
  rs49505587
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:75831276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTA TTCCTATTCA AACTCCCAGT
  C
  AGGTGCACTG TCTCAAGGGC AAATG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss135332038	ENSMUSSNP3290180	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs49505587					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:75831276 () rs orientation: forward

Symbol	Name	Function Class
Golim4	golgi integral membrane protein 4	within coordinates
Rr72842	regulatory region 72842	1476 bp distal
Rr81458	regulatory region 81458	726 bp proximal