rs49507276 SNP Detail

Summary

• ID
  rs49507276
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:94202895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAAATGAG AGAGCTCTTT
  GTCAGTGGTA TTAGAAGTCA CTTCCCCAAA GCCTTTAGGA ACATTTAGGA ATAGCCTCTG
  ATTACAAAGT GCTTCCTGGG ATGGGGGTGA GGATCATTCT GGGGGTAACT AGCTGTGAGC
  AGCTTTGGGC CTCTGCAGGC TTTGAAGCCT GTCTCATTGC TGAGTTTCCC CACTCCCGCC
  Y
  CTGCTTTGGC TCAGACCTTC GAGATAATGA GCAACTCTAT CTGAAGTAAT AGGTGGACAG
  AAATGGACAT CAAAGGACCC CCATCCTTCA AGGACGGGCT GGGATTTGAT TTAAGAAGAG
  TTGGATGATT AAGGCAGCAG CTTTGCCTAT CATTAGAACA ATCCAGCCAG CCTCCTCTTC
  TACAGATGCA GGATACATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss144960310	ENSMUSSNP642022	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49507276					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:94202895 () rs orientation: forward

Symbol	Name	Function Class
Lhfpl2	lipoma HMGIC fusion partner-like 2	within coordinates
Rr274132	regulatory region 274132	1106 bp proximal
Rr285346	regulatory region 285346	1707 bp proximal