rs49509583 SNP Detail

Summary

• ID
  rs49509583
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98944076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGCCTCTGC CTCCCCAGTG CTGGGATTAA AGGCATGTGC
  CACCAAACCC AGCTGTTTTT TGGTTGTTTT TTTTTTTTTT TTTTAAAGAT TTATTTATTT
  T
  ATGTCTGTGA GTACACTGTA GCTGTACAGA TGGTTGTGAG CCTTCATGTG GTTGTTGGGA
  ATTGACTTTT TAGGACTTCT GCTCGCTCTA ATCAACTAT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148463788	ENSMUSSNP4650468	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs49509583					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98944076 () rs orientation: forward

Symbol	Name	Function Class
D15Jcs28	DNA segment, Chr 15, John C. Schimenti 28	1629 bp proximal
Gm41399	predicted gene, 41399	within coordinates
Rr305847	regulatory region 305847	1876 bp distal
Rr311358	regulatory region 311358	894 bp proximal