rs49520506 SNP Detail

Summary

• ID
  rs49520506
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61334800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAATCACTG CCCTAAGGAT
  GCTTAGTTCC TGAGTAAGGT AGTATCTGTG TCTATTAGTT ACATCAAGAT TTTTCAGAGA
  CTCCATGGTG GTATGTAGCA GGCATTTGCT TCCACAGCAC TTCTCACAGT GTCTAACCTA
  AGTTTGTGAA AATGTGAAAA TTTTTCTTAG TCTCTGTCAC AAGCTGAGAT TGAATCTTGT
  R
  TCTTCTTTGC AGAAGACATA TTCCAGCATG ACTGAGAAAA GTGTGTCATT CTCCAAATCT
  CCCATAGAGA TTCTCCGAAT CTCCCATAGA GCGACAGCTA CAATACAAAA CGACCAAAGC
  AATCAGTGCA TTGAGGCTCT GAAATAAACA AGCACAGGCT TTGATGATTT CACTGGCGCT
  GTCTGCTGAC AGTGACACAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss144742971	ENSMUSSNP4992955	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49520506					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61334800 () rs orientation: forward

Symbol	Name	Function Class
Gm72252	predicted gene, 72252	1231 bp downstream
Mir344d-1	microRNA 344d-1	1860 bp upstream
Mir344d-2	microRNA 344d-2	220 bp downstream