rs49536342 SNP Detail

Summary

• ID
  rs49536342
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:32395243 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGTC TAGGAGCCCA GGAAAGAACT
  R
  GATGGGAGGG GAACGTGTGC CCAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147950210	ENSMUSSNP6085638	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss325136888	CHEV_16_32576511	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs49536342					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:32395243 () rs orientation: forward

Symbol	Name	Function Class
Gm60756	predicted gene, 60756	1631 bp upstream
Rr317723	regulatory region 317723	1758 bp proximal
Rr391588	regulatory region 391588	1960 bp upstream