rs49551161 SNP Detail

Summary

• ID
  rs49551161
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:17556910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCCTTTGTT CACAGAAACA CTGCCAAGTG TCTTCTTGCT
  GTTAAATATC AGTTTTGCAT CTTTGATGCA AACTATCTTG CTTTACTAAA TGTCTAACTA
  W
  GCACCTATCC ATTTGGTTCT GTTTGGTATT CAATTGTAAT AATTTGTTTA TACAATCAAT
  AATTACTAAT GGTAAATAAA ATTTTAACAC ATTAAATGTA                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ
ss60694786	NES16223702	PERLEGEN	MM_PANEL2	f	SNP	A	T	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ
rs49551161					SNP	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60694786	NES16223702	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:17556910 () rs orientation: forward

Symbol	Name	Function Class
Gm68015	predicted gene, 68015	1038 bp downstream